MRC2 Publications

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2016
Turcu AF, Nanba AT, Chomic R, Upadhyay SK, Giordano TJ, Shields JJ, Merke DP, Rainey WE, Auchus RJ.  2016.  Adrenal-derived 11-oxygenated 19-carbon steroids are the dominant androgens in classic 21-hydroxylase deficiency.. Eur J Endocrinol. 174(5):601-9.
2015
Scher JU, Ubeda C, Artacho A, Attur M, Isaac S, Reddy SM, Marmon S, Neimann A, Brusca S, Patel T et al..  2015.  Decreased bacterial diversity characterizes the altered gut microbiota in patients with psoriatic arthritis, resembling dysbiosis in inflammatory bowel disease.. Arthritis Rheumatol. 67(1):128-39.
Tsou C-C, Avtonomov D, Larsen B, Tucholska M, Choi H, Gingras A-C, Nesvizhskii AI.  2015.  DIA-Umpire: comprehensive computational framework for data-independent acquisition proteomics.. Nat Methods. 12(3):258-64,7pfollowing264.
Overmyer KA, Thonusin C, Qi NR, Burant CF, Evans CR.  2015.  Impact of anesthesia and euthanasia on metabolomics of mammalian tissues: studies in a C57BL/6J mouse model.. PLoS One. 10(2):e0117232.
Veiga-Lopez A, Pennathur S, Kannan K, Patisaul HB, Dolinoy DC, Zeng L, Padmanabhan V.  2015.  Impact of gestational bisphenol A on oxidative stress and free fatty acids: Human association and interspecies animal testing studies.. Endocrinology. 156(3):911-22.
Sas KM, Karnovsky A, Michailidis G, Pennathur S.  2015.  Metabolomics and diabetes: analytical and computational approaches.. Diabetes. 64(3):718-32.
Guo Y, Fan Y, Zhang J, Lomberk GA, Zhou Z, Sun L, Mathison AJ, Garcia-Barrio MT, Zhang J, Zeng L et al..  2015.  Perhexiline activates KLF14 and reduces atherosclerosis by modulating ApoA-I production.. J Clin Invest. 125(10):3819-30.
Yoh SM, Schneider M, Seifried J, Soonthornvacharin S, Akleh RE, Olivieri KC, De Jesus PD, Ruan C, de Castro E, Ruiz PA et al..  2015.  PQBP1 Is a Proximal Sensor of the cGAS-Dependent Innate Response to HIV-1.. Cell. 161(6):1293-305.
Turcu AF, Rege J, Chomic R, Liu J, Nishimoto HK, Else T, Moraitis AG, Palapattu GS, Rainey WE, Auchus RJ.  2015.  Profiles of 21-Carbon Steroids in 21-hydroxylase Deficiency.. J Clin Endocrinol Metab. 100(6):2283-90.
2014
Wardlaw SL, Burant CF, Klein S, Meece K, White A, Kasten T, Lucey BP, Bateman RJ.  2014.  Continuous 24-hour leptin, proopiomelanocortin, and amino acid measurements in human cerebrospinal fluid: correlations with plasma leptin, soluble leptin receptor, and amino acid levels.. J Clin Endocrinol Metab. 99(7):2540-8.
Abu-Soud HM, Maitra D, Shaeib F, Khan SN, Byun J, Abdulhamid I, Yang Z, Saed GM, Diamond MP, Andreana PR et al..  2014.  Disruption of heme-peptide covalent cross-linking in mammalian peroxidases by hypochlorous acid.. J Inorg Biochem. 140:245-54.
Clyman RI, Wickremasinghe A, T Merritt A, Solomon T, McNamara P, Jain A, Singh J, Chu A, Noori S, Sekar K et al..  2014.  Hypotension following patent ductus arteriosus ligation: the role of adrenal hormones.. J Pediatr. 164(6):1449-55.e1.
Hinder LM, Figueroa-Romero C, Pacut C, Hong Y, Vivekanandan-Giri A, Pennathur S, Feldman EL.  2014.  Long-chain acyl coenzyme A synthetase 1 overexpression in primary cultured Schwann cells prevents long chain fatty acid-induced oxidative stress and mitochondrial dysfunction.. Antioxid Redox Signal. 21(4):588-600.
Duren W, Weymouth T, Hull T, Omenn GS, Athey B, Burant C, Karnovsky A.  2014.  MetDisease--connecting metabolites to diseases via literature.. Bioinformatics. 30(15):2239-41.
Michaud DS, Izard J.  2014.  Microbiota, oral microbiome, and pancreatic cancer.. Cancer J. 20(3):203-6.
Lanning NJ, Looyenga BD, Kauffman AL, Niemi NM, Sudderth J, DeBerardinis RJ, MacKeigan JP.  2014.  A mitochondrial RNAi screen defines cellular bioenergetic determinants and identifies an adenylate kinase as a key regulator of ATP levels.. Cell Rep. 7(3):907-17.
Smith CK, Vivekanandan-Giri A, Tang C, Knight JS, Mathew A, Padilla RL, Gillespie BW, Carmona-Rivera C, Liu X, Subramanian V et al..  2014.  Neutrophil extracellular trap-derived enzymes oxidize high-density lipoprotein: an additional proatherogenic mechanism in systemic lupus erythematosus.. Arthritis Rheumatol. 66(9):2532-44.
Evans CR, Karnovsky A, Kovach MA, Standiford TJ, Burant CF, Stringer KA.  2014.  Untargeted LC-MS metabolomics of bronchoalveolar lavage fluid differentiates acute respiratory distress syndrome from health.. J Proteome Res. 13(2):640-9.
Niewczas MA, Sirich TL, Mathew AV, Skupien J, Mohney RP, Warram JH, Smiles A, Huang X, Walker W, Byun J et al..  2014.  Uremic solutes and risk of end-stage renal disease in type 2 diabetes: metabolomic study.. Kidney Int. 85(5):1214-24.
2013
Simon BR, Parlee SD, Learman BS, Mori H, Scheller EL, Cawthorn WP, Ning X, Gallagher K, Tyrberg B, Assadi-Porter FM et al..  2013.  Artificial sweeteners stimulate adipogenesis and suppress lipolysis independently of sweet taste receptors.. J Biol Chem. 288(45):32475-89.
Taylor LK, Auchus RJ, Baskin LS, Miller WL.  2013.  Cortisol response to operative stress with anesthesia in healthy children.. J Clin Endocrinol Metab. 98(9):3687-93.
Vivekanandan-Giri A, Slocum JL, Byun J, Tang C, Sands RL, Gillespie BW, Heinecke JW, Saran, iv R, Kaplan MJ, Pennathur S.  2013.  High density lipoprotein is targeted for oxidation by myeloperoxidase in rheumatoid arthritis.. Ann Rheum Dis. 72(10):1725-31.
Tripathi P, Somashekar BS, Ponnusamy M, Gursky A, Dailey S, Kunju P, Lee CT, Chinnaiyan AM, Rajendiran TM, Ramamoorthy A.  2013.  HR-MAS NMR tissue metabolomic signatures cross-validated by mass spectrometry distinguish bladder cancer from benign disease.. J Proteome Res. 12(7):3519-28.
McDonnell SRP, Hwang SR, Rolland D, Murga-Zamalloa C, Basrur V, Conlon KP, Fermin D, Wolfe T, Raskind A, Ruan C et al..  2013.  Integrated phosphoproteomic and metabolomic profiling reveals NPM-ALK-mediated phosphorylation of PKM2 and metabolic reprogramming in anaplastic large cell lymphoma.. Blood. 122(6):958-68.
Wooding KM, Auchus RJ.  2013.  Mass spectrometry theory and application to adrenal diseases.. Mol Cell Endocrinol. 371(1-2):201-7.
Shellman ER, Burant CF, Schnell S.  2013.  Network motifs provide signatures that characterize metabolism.. Mol Biosyst. 9(3):352-60.
Davda D, Azzouny MAEl, Tom CTMB, Hernandez JL, Majmudar JD, Kennedy RT, Martin BR.  2013.  Profiling targets of the irreversible palmitoylation inhibitor 2-bromopalmitate.. ACS Chem Biol. 8(9):1912-7.
2012
Evans SJ, Kamali M, Prossin AR, Harrington GJ, Ellingrod VL, McInnis MG, Burant CF.  2012.  Association of plasma ω-3 and ω-6 lipids with burden of disease measures in bipolar subjects.. J Psychiatr Res. 46(11):1435-41.
Izadpanah A, R Barnard J, Almeda AJane E, Baldwin GC, Bridges SA, Shellman ER, Burant CF, Roberts CK.  2012.  A short-term diet and exercise intervention ameliorates inflammation and markers of metabolic health in overweight/obese children.. Am J Physiol Endocrinol Metab. 303(4):E542-50.